The detailed information of tRNA gene sequence


Sequence ID>SRA1007440
Genome IDSRR020488.452405
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 216
End posion on genome 291
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position
tatttttccT
tRNA gene sequence
GGGCCATTAGCTCAGGTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCCCTGGTTCAAG
TCCAGGATGGCCCATan
Downstream region at tRNA end position
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1007440	Ile	GAT
                   T      ATan nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     G G A C C     A
      G G A        A      | | | | |     A
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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