The detailed information of tRNA gene sequence


Sequence ID>SRA1007449
Genome IDSRR020488.456644
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 205
End posion on genome 130
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
gctactaaat
tRNA gene sequence
CGGGGTGTAGCGTAGCCCGGTCATCGCGCCTGCTTTGGGAGCAGGAGGTCGCAGGTTCGA
ATCCTGCCACCCCGACtt
Downstream region at tRNA end position
tatagcattt
Secondary structure (Cloverleaf model)
>SRA1007449	Pro	TGG
                   t      ACtt tatagcattt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
    C C G A        A      | | | | |     G
  C         T G C G       G C A G G     C
  G           | | |                 T T
  G         T C G C
    T C A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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