The detailed information of tRNA gene sequence


Sequence ID>SRA1007453
Genome IDSRR020488.457679
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 135
End posion on genome 59
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
acaataattt
tRNA gene sequence
GGGGTAGTAGTTCAGTTGGTTAGAACGCCGGCCTGTCAAGCCGGAGGTCGCGGGTTCGAG
TCCCGTCTATCCCGCAA
Downstream region at tRNA end position
ctttcgatga
Secondary structure (Cloverleaf model)
>SRA1007453	Asp	GTC
                   t      GCAA ctttcgatga
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     A - T
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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