The detailed information of tRNA gene sequence


Sequence ID>SRA1007476
Genome IDSRR020489.20978
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 3
End posion on genome 78
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position
nnnnnnnngt
tRNA gene sequence
GCCGTTTTAGCTTAGCTGGTGGAGCGTGGGACTGTTAATCCCAAGGTCATGGGTTCGAAC
CCCATAAACGGCGCCT
Downstream region at tRNA end position
ttccgtaatc
Secondary structure (Cloverleaf model)
>SRA1007476	Asn	GTT
                   t      GCCT ttccgtaatc
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     T - A
                     T - A          C A
                    T     T A C C C     A
      C G A        A      | | | | |     G
    T       T T C G       A T G G G     C
    G       + | | |                 T T
    G       G A G C
      T G          G     AGGTC
                    T - A
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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