The detailed information of tRNA gene sequence


Sequence ID>SRA1007490
Genome IDSRR020489.31513
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 122
End posion on genome 38
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position
ctttatttag
tRNA gene sequence
GGAGAGGTGGCTGAGAGGTTGAAAGCGAACGATTCGAAATCGTTTAATGGGAAACTATTC
GTGGGTTCGAATCCCACCCTCTCCGtaa
Downstream region at tRNA end position
cttttttaac
Secondary structure (Cloverleaf model)
>SRA1007490	Ser	CGA
                   g      Gtaa cttttttaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      A G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TAATGGGAAACTATTC
                    A - T
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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