The detailed information of tRNA gene sequence


Sequence ID>SRA1007500
Genome IDSRR020489.39899
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 85
End posion on genome 9
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atatgaaaat
tRNA gene sequence 
GGCGACGTGGCCAAGTGGTTTAAGGCGGAGGTCTGCAAAACCTTTATTCGGCGGTTCGAA
TCCGCCCGTCGCCTCCA
Downstream region at tRNA end position 
aattattann
Secondary structure (Cloverleaf model)
>SRA1007500	Cys	GCA
                   t      TCCA aattattann
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C C G C C     A
      T G A        G      | | | | |     G
    G       A C C G       G G C G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TATTC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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