The detailed information of tRNA gene sequence


Sequence ID>SRA1007506
Genome IDSRR020489.43562
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 49
End posion on genome 138
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
ttctgctatc
tRNA gene sequence
GGAGAGGTGACCGAGTGGCCGAAGGTGCGTGATTGGAAATCACGTGTGCGGGCAACCGTA
CCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position
tattttannn
Secondary structure (Cloverleaf model)
>SRA1007506	Ser	GGA
                   c      GCCA tattttannn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTGCGGGCAACCGTACC
                    C - G
                    G - C
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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