The detailed information of tRNA gene sequence


Sequence ID>SRA1007516
Genome IDSRR020489.49541
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 28
End posion on genome 102
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position
aaaataataa
tRNA gene sequence
TGTCTTATAACTCAGTTGGTTAGAGTGGTGGTCTTATGAGCCGCAAGTCGTGGGTTCAAG
TCCCACTAAGACAACat
Downstream region at tRNA end position
ggatttattt
Secondary structure (Cloverleaf model)
>SRA1007516	Ile	TAT
                   a      ACat ggatttattt
                     T - A
                     G - C
                     T - A
                     C - G
                     T - A
                     T - A
                     A - T          T G
                    T     C A C C C     A
      T G A        A      | | | | |     A
    T       C T C A       G T G G G     C
    G       | | | |                 T T
    G       G A G T
      T T A        G     AAGTC
                    G - C
                    T + G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       G
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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