The detailed information of tRNA gene sequence


Sequence ID>SRA1007528
Genome IDSRR020489.60000
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 102
End posion on genome 27
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tagcagacgt
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGCGCGACACTGGCAGTGTCGAGGTCGGCGGTTCGATC
CCGCCTAGCTCCACCA
Downstream region at tRNA end position 
aattcttctt
Secondary structure (Cloverleaf model)
>SRA1007528	Ala	GGC
                   t      ACCA aattcttctt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     C C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G - C
                    A - T
                    C - G
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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