The detailed information of tRNA gene sequence


Sequence ID>SRA1007539
Genome IDSRR020489.74413
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 117
End posion on genome 29
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atttatgccT
tRNA gene sequence 
GGAGGGGTGGTCGAGTGGTTTAAGGCTCTAGTCTTGAAAACTAGCGTGTCTGCAAGGGCA
CCGTGGGTTCAATCCCCACCCCCTCCGTtc
Downstream region at tRNA end position 
aaataaagag
Secondary structure (Cloverleaf model)
>SRA1007539	Ser	TGA
                   T      GTtc aaataaagag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          C T
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G C T G       G T G G G     C
    G         | + |                 T T
    T       A G G C
      T T A        T     CGTGTCTGCAAGGGCACC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK