The detailed information of tRNA gene sequence


Sequence ID>SRA1007542
Genome IDSRR020489.77946
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 100
End posion on genome 24
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position
ttataaaaat
tRNA gene sequence
GCGCCCGTAGCTCAGCTGGATAGAGTACTTGGCTTCGAACCAAGGGGTCGGGAGTTCGAA
TCTCTCCGGGCGTGCCA
Downstream region at tRNA end position
atgaaataca
Secondary structure (Cloverleaf model)
>SRA1007542	Arg	TCG
                   t      GCCA atgaaataca
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C T C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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