The detailed information of tRNA gene sequence


Sequence ID>SRA1007546
Genome IDSRR020489.79664
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 28
End posion on genome 104
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttaaataagt
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGTTAGAGCGATCGCCTGTCACGCGATAGGTCGAGGGTTCGAG
TCCCTTCACTCCCGCCA
Downstream region at tRNA end position 
cttaaaaaac
Secondary structure (Cloverleaf model)
>SRA1007546	Asp	GTC
                   t      GCCA cttaaaaaac
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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