The detailed information of tRNA gene sequence


Sequence ID>SRA1007548
Genome IDSRR020489.81077
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 27
End posion on genome 102
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aaaatctttt
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGCGCCTGATTTGCATTCAGGAGGTCCGCGGTTCGATC
CCGCGTAGCTCCACCA
Downstream region at tRNA end position 
aaataaattc
Secondary structure (Cloverleaf model)
>SRA1007548	Ala	TGC
                   t      ACCA aaataaattc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     G C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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