The detailed information of tRNA gene sequence


Sequence ID>SRA1007558
Genome IDSRR020489.88355
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 29
End posion on genome 115
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
ggatatcctG
tRNA gene sequence
GGAGAGGTGGCCGAGTGGTTGAAGGCGCAGCACTGGAAATGCTGTATAAGGGCAACTTTA
TCAGGGTTCGAATCCCTCTCTCTCCGttt
Downstream region at tRNA end position
tatattagtt
Secondary structure (Cloverleaf model)
>SRA1007558	Ser	GGA
                   G      Gttt tatattagtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G        | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATAAGGGCAACTTTAT
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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