The detailed information of tRNA gene sequence


Sequence ID>SRA1007683
Genome IDSRR020489.209063
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 63
End posion on genome 138
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position
tggtccctgT
tRNA gene sequence
CGGAGCGTGGCGCAGCCTGGTAGCGCGCTACACTGGGGGTGTAGAGGTCGTGGGTTCGAG
TCCCGCCGCTCCGATnn
Downstream region at tRNA end position
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1007683	Pro	GGG
                   T      ATnn nnnnnnnnnn
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T G
                    T     C G C C C     A
      C G A        G      | + | | |     G
    C       C G C G       G T G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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