The detailed information of tRNA gene sequence


Sequence ID>SRA1007696
Genome IDSRR020490.7805
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 31
End posion on genome 104
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
acggtcttgg
tRNA gene sequence 
GAGCCGCTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCACAGGTTCGATC
CCTGTGCGGCTCACgt
Downstream region at tRNA end position 
tgtaggnnnn
Secondary structure (Cloverleaf model)
>SRA1007696	Lys	TTT
                   g      ACgt tgtaggnnnn
                     G - C
                     A - T
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G          C T
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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