The detailed information of tRNA gene sequence


Sequence ID>SRA1007704
Genome IDSRR020490.10069
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 105
End posion on genome 30
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
tgcattatat
tRNA gene sequence
CGCGGGGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCAGGTTCAAGT
CCTGCCCCCGCTACTA
Downstream region at tRNA end position
aaacaataaa
Secondary structure (Cloverleaf model)
>SRA1007704	Met	CAT
                   t      ACTA aaacaataaa
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G T C C     A
      T G A        G      | | | | |     A
    T       C G A G       G C A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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