The detailed information of tRNA gene sequence


Sequence ID>SRA1007714
Genome IDSRR020490.18289
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 146
End posion on genome 74
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ctttcccatG
tRNA gene sequence 
GGTTAGATAACATAATGGTAATGTTGTGGATTGCAAATCCTTGAATGACGGTTCGATTCC
GTCTCTAACCTGgc
Downstream region at tRNA end position 
tggcgggtat
Secondary structure (Cloverleaf model)
>SRA1007714	Cys	GCA
                   G      TGgc tggcgggtat
                     G - C
                     G - C
                     T - A
                     T - A
                     A - T
                     G - C
                     A - T          T T
                    T     C T G C C     A
        A A        A      | | | | |     G
      T     T A C A       G A C G G     C
      G     | | | |                 T T
      G     A T G T
        T A        T     GAAT
                    G + T
                    T   T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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