The detailed information of tRNA gene sequence


Sequence ID>SRA1007718
Genome IDSRR020490.20479
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 16
End posion on genome 92
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aattaacgat
tRNA gene sequence 
CGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAAGTTCAAA
TCTTGCCCCCGCTACAA
Downstream region at tRNA end position 
cgaaaacccg
Secondary structure (Cloverleaf model)
>SRA1007718	Met	CAT
                   t      ACAA cgaaaacccg
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T T C     A
      T G A        A      | | | | |     A
    C       C G A G       G C A A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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