The detailed information of tRNA gene sequence


Sequence ID>SRA1007723
Genome IDSRR020490.24232
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 46
End posion on genome 130
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acgaatcgta
tRNA gene sequence 
GCCGAGATCGCATAGCCTGGTAGTGCGCGTGACTGGAAATCACGTGGGCCCGTTCCCGCG
GGAGTTCAAATCTCCCTCTCGGCGCtc
Downstream region at tRNA end position 
cactttttgg
Secondary structure (Cloverleaf model)
>SRA1007723	Ser	GGA
                   a      GCtc cactttttgg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C T C     A
      C G A        C      | | | | |     A
    C       T A C G       G G G A G     C
    T       + | | |                 T T
    G       G T G C
      G T A        G     TGGGCCCGTTCCCGC
                    C - G
                    G - C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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