The detailed information of tRNA gene sequence


Sequence ID>SRA1007768
Genome IDSRR020490.50016
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 162
End posion on genome 89
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtttacccat
tRNA gene sequence 
GGGGGTATAGTATAGCTTGGTATTACTACCGGCTCCAGACCGGTGGAGGGGGGTTCAAAT
CCCTCTGCCCCCACtt
Downstream region at tRNA end position 
taatgctcaa
Secondary structure (Cloverleaf model)
>SRA1007768	Trp	CCA
                   t      ACtt taatgctcaa
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T A
                    T     C T C C C     A
      C G A        A      | + | | |     A
    T       T A T G       G G G G G     C
    T         | | |                 T T
    G       T T A C
      G T A        T     GGAG
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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