The detailed information of tRNA gene sequence


Sequence ID>SRA1007777
Genome IDSRR020490.57586
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 162
End posion on genome 81
Amino Acid Ser
Anticodon AGA
Upstream region at tRNA start position 
cgtacactag
tRNA gene sequence 
GCAGTCGTGGCCGAGTGGTTAAGGCGACTGACTAGAAATCAGTTTCCCTCTGGGAGCGCA
GGTTCGAATCCTGCCGACTGCGtaa
Downstream region at tRNA end position 
atattttcaa
Secondary structure (Cloverleaf model)
>SRA1007777	Ser	AGA
                   g      Gtaa atattttcaa
                     G - C
                     C - G
                     A - T
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C A G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TTCCCTCTGGGAGC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    A G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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