The detailed information of tRNA gene sequence


Sequence ID>SRA1007781
Genome IDSRR020490.59458
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 249
End posion on genome 176
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
nnnnnnnctT
tRNA gene sequence 
GGTCCATTCGTATAATGGTTAGTACGCTAGCTTGTCACGCTAGTAATGCGAGTTCGATCC
TCGCATGGACCGTtg
Downstream region at tRNA end position 
cctctcaatg
Secondary structure (Cloverleaf model)
>SRA1007781	Asp	GTC
                   T      GTtg cctctcaatg
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     A - T
                     T - A          C T
                    T     C G C T C     A
      T A A        C      | | | | |     G
    G       T A T G       G C G A G     C
    G       + | | |                 T T
    T       G T A C
      T A          G     TAAT
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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