The detailed information of tRNA gene sequence


Sequence ID>SRA1007800
Genome IDSRR020490.69535
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 186
End posion on genome 100
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position
ttattttaag
tRNA gene sequence
GGAGAGGTGGCTGAGTGGTCGAAAGCGAACGACTCGAAATCGTTTGATAGCTAAAACTAT
CCGTGGGTTCGAATCCCACCCTCTCCGtat
Downstream region at tRNA end position
ttttaacgtg
Secondary structure (Cloverleaf model)
>SRA1007800	Ser	CGA
                   g      Gtat ttttaacgtg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGATAGCTAAAACTATCC
                    A - T
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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