The detailed information of tRNA gene sequence


Sequence ID>SRA1007819
Genome IDSRR020490.80099
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 119
End posion on genome 195
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atttcagatg
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTTAGAGCAGTACACTCATAATGTATTGGTCCCAGGTTCGAG
TCCTGGATCGCCCACCA
Downstream region at tRNA end position 
aacttcatat
Secondary structure (Cloverleaf model)
>SRA1007819	Met	CAT
                   g      ACCA aacttcatat
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     G G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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