The detailed information of tRNA gene sequence


Sequence ID>SRA1007827
Genome IDSRR020490.82390
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 5
End posion on genome 86
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
nnnnnnaatc
tRNA gene sequence 
GGGTCGGTGCCCGAGTGGTTAATGGGGGCGGACTGTAAATCCGCTGGCTACGCCTACGTT
GGTTCAAATCCAACCCGGCCCAtct
Downstream region at tRNA end position 
ttccacaagc
Secondary structure (Cloverleaf model)
>SRA1007827	Tyr	GTA
                   c      Atct ttccacaagc
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C
                     G - C          T A
                    T     C A A C C     A
      T G A        G      | | | | |     A
    G       G C C C       G T T G G     C
    G       + | | |                 T T
    T       T G G G
      T A A        G     TGGCTACGCCTAC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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