The detailed information of tRNA gene sequence


Sequence ID>SRA1007830
Genome IDSRR020490.84369
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 241
End posion on genome 154
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cctaaattat
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTTAAGGCGGCGGTCTTGAAAACCGTTGTGGGTTAATCCCCA
CCCAGGGTTCGAATCCCTGTCTCTCCGCac
Downstream region at tRNA end position 
acaaaaaagt
Secondary structure (Cloverleaf model)
>SRA1007830	Ser	TGA
                   t      GCac acaaaaaagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         + | |                 T T
    T       A G G C
      T T A        G     TGTGGGTTAATCCCCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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