The detailed information of tRNA gene sequence


Sequence ID>SRA1007838
Genome IDSRR020490.87608
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 48
End posion on genome 124
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
tttacgtgtt
tRNA gene sequence 
GCGCCTGTAGCTCAGCTGGATAGAGTACTTGGCTTCGAACCAAGGGGTCGGGAGTTCGAA
TCTTCCCGGGCGCGCCA
Downstream region at tRNA end position 
ataagggagg
Secondary structure (Cloverleaf model)
>SRA1007838	Arg	TCG
                   t      GCCA ataagggagg
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C C T T C     A
      C G A        A      | | + | |     G
    T       C T C G       G G G A G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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