The detailed information of tRNA gene sequence


Sequence ID>SRA1007858
Genome IDSRR020490.96187
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 115
End posion on genome 187
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ctttccacaa
tRNA gene sequence 
GCCCTTGTAGCTCAGCGGTAGAGCACTCCCTTGGTAAGGGAGAGGTCTCGGGTTCAAGTC
CCGACGAGGGCACtg
Downstream region at tRNA end position 
ccctcaaccg
Secondary structure (Cloverleaf model)
>SRA1007858	Thr	GGT
                   a      ACtg ccctcaaccg
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     T + G
                     G - C          T G
                    T     A G C C C     A
        G A        A      | | | | |     A
      C     C T C G       T C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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