The detailed information of tRNA gene sequence


Sequence ID>SRA1007864
Genome IDSRR020490.98763
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 192
End posion on genome 105
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctcctttatt
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTTTAAGGCGCACGCTTGGAGAGCGTGTATACTTTCGGGTATC
GTGGGTTCGAATCCCACTCTCTCCGCCT
Downstream region at tRNA end position 
aattttttac
Secondary structure (Cloverleaf model)
>SRA1007864	Ser	GGA
                   t      GCCT aattttttac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TATACTTTCGGGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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