The detailed information of tRNA gene sequence


Sequence ID>SRA1007867
Genome IDSRR020490.100119
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 101
End posion on genome 177
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ggcaccatgt
tRNA gene sequence 
GGAGCGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAA
TCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
ctttatcttt
Secondary structure (Cloverleaf model)
>SRA1007867	Asp	GTC
                   t      GCCA ctttatcttt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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