The detailed information of tRNA gene sequence


Sequence ID>SRA1007876
Genome IDSRR020490.106049
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 145
End posion on genome 218
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ttttagtttT
tRNA gene sequence 
GCCGGTATAGCTCAGCGGTAGAGCAACTGTCTCGTAAACAGTAAGTCATTGGTTCAATTC
CAATTATCGGCATtt
Downstream region at tRNA end position 
caaaagcaat
Secondary structure (Cloverleaf model)
>SRA1007876	Thr	CGT
                   T      ATtt caaaagcaat
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     T - A
                     A - T          T T
                    T     T A A C C     A
        G A        A      | | | | |     A
      C     C T C G       A T T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AAGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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