The detailed information of tRNA gene sequence


Sequence ID>SRA1007880
Genome IDSRR020490.106822
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 111
End posion on genome 200
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
atttgctcct
tRNA gene sequence
GGAGAGGTGGCTGAGCGGTTGAAAGCACTAGTCTTGAAAACTAGCAATGGGGCAACTCAT
TCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position
gtaatctata
Secondary structure (Cloverleaf model)
>SRA1007880	Ser	TGA
                   t      GCCA gtaatctata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        A     CAATGGGGCAACTCATTC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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