The detailed information of tRNA gene sequence


Sequence ID>SRA1007892
Genome IDSRR020490.111584
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 175
End posion on genome 100
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
gagatcgtac
tRNA gene sequence
AGGCCTGTAGCTCAACTGGCAGAGCGGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGATT
CCCTCCGGGCCTGCCA
Downstream region at tRNA end position
attaggacat
Secondary structure (Cloverleaf model)
>SRA1007892	Trp	CCA
                   c      GCCA attaggacat
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T T
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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