The detailed information of tRNA gene sequence


Sequence ID>SRA1007896
Genome IDSRR020490.113427
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 147
End posion on genome 70
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
attgagcatt
tRNA gene sequence
GGCGGCGTAGCTCAGCTTGGTGAGAGCGCACGGTTCATACCCGTGAGGTCACTGGTTCGA
CTCCAGTCGCCGCTACCA
Downstream region at tRNA end position
atttaaaaat
Secondary structure (Cloverleaf model)
>SRA1007896	Met	CAT
                   t      ACCA atttaaaaat
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T C
                    T     T G A C C     A
    T C G A        A      | | | | |     G
  T         C T C G       A C T G G     C
  G         | | | |                 T T
  G         G A G C
    T G A          G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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