The detailed information of tRNA gene sequence


Sequence ID>SRA1007898
Genome IDSRR020490.114257
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 229
End posion on genome 154
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
attagacgtg
tRNA gene sequence
CGGGCTGTGGCTCAGCTTGGCTAGAGCGCCTGGTTTGGGACCAGGAGGTCGTGAGTTCGA
ATCTCACCAGCCCGACgc
Downstream region at tRNA end position
acgcgggtgt
Secondary structure (Cloverleaf model)
>SRA1007898	Pro	TGG
                   g      ACgc acgcgggtgt
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     C A C T C     A
    T C G A        G      | | | | |     G
  T         C T C G       G T G A G     C
  G         | | | |                 T T
  G         G A G C
    C T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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