The detailed information of tRNA gene sequence


Sequence ID>SRA1007910
Genome IDSRR020490.117344
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 147
End posion on genome 75
Amino Acid Thr
Anticodon AGT
Upstream region at tRNA start position
ttctctattt
tRNA gene sequence
GCCTTCGTAGCTTAGTTGGCAGAGCACTCGCTTAGTAAGCGAGAGGTCACGGGTTCGAAT
CCCGTCGAAGGCTttt
Downstream region at tRNA end position
gtacctaatg
Secondary structure (Cloverleaf model)
>SRA1007910	Thr	AGT
                   t      Tttt gtacctaatg
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A
                     C - G
                     G - C          T A
                    T     T G C C C     A
      T G A        A      | | | | |     G
    T       T T C G       A C G G G     C
    G       + | | |                 T T
    G       G A G C
      C A          A     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    A G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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