The detailed information of tRNA gene sequence


Sequence ID>SRA1007916
Genome IDSRR020490.121197
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 140
End posion on genome 65
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position
tatttttttt
tRNA gene sequence
GCGGGTGTAGCTCAGTTGGTAGAGCATCAGCTTCCCAAGCTGGAGGTCGCGAGTTCGAAT
CTCGTCGCCCGCTCAA
Downstream region at tRNA end position
ttagtattta
Secondary structure (Cloverleaf model)
>SRA1007916	Gly	CCC
                   t      TCAA ttagtattta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    T + G
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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