The detailed information of tRNA gene sequence


Sequence ID>SRA1007920
Genome IDSRR020490.122374
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 108
End posion on genome 19
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
cctaatatgt
tRNA gene sequence
GGATGGGTGGCTGAGCGGTTGAAAGCACCGGTCTTGAAAACCGGCAAGGGTGAAAGCCCT
TCGTGGGTTCGAATCCCACCCCATCCGCCA
Downstream region at tRNA end position
tactaccaaa
Secondary structure (Cloverleaf model)
>SRA1007920	Ser	TGA
                   t      GCCA tactaccaaa
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        A     CAAGGGTGAAAGCCCTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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