The detailed information of tRNA gene sequence


Sequence ID>SRA1007953
Genome IDSRR020490.138750
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 123
End posion on genome 196
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
ttttagattt
tRNA gene sequence
GGCGGCGTAGCTCAGTTGGTAAGAGCGCACGACTCATAATCGTGAGGTCGGCAGTTCAAG
TCTGCCCGCCGCTTnnn
Downstream region at tRNA end position
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1007953	Met	CAT
                   t      Tnnn nnnnnnnnnn
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C C G T C     A
      T G A        A      | | | | |     A
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T A A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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