The detailed information of tRNA gene sequence


Sequence ID>SRA1007978
Genome IDSRR020490.148213
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 97
End posion on genome 21
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
ttcaaatcgg
tRNA gene sequence
GGCGGAGTAGCTCAGGTGGTTAGAGCAGTGGAATCATAATCCATGTGTCGGGGGTTCAAG
TCCCTCCTCCGCTACCA
Downstream region at tRNA end position
ccaaattcca
Secondary structure (Cloverleaf model)
>SRA1007978	Met	CAT
                   g      ACCA ccaaattcca
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      G G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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