The detailed information of tRNA gene sequence


Sequence ID>SRA1007981
Genome IDSRR020490.150976
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 229
End posion on genome 140
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aatttgctta
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCTAAGGCGGTAGACTCGAAATCTATTGTGCGTTTACACGTA
CCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tacatacttt
Secondary structure (Cloverleaf model)
>SRA1007981	Ser	CGA
                   a      GCCA tacatacttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TGTGCGTTTACACGTACC
                    G + T
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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