The detailed information of tRNA gene sequence


Sequence ID>SRA1007990
Genome IDSRR020490.153665
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 260
End posion on genome 169
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
ttggttattt
tRNA gene sequence
GGAAGAGTGGGTGAGCGGTTGAAACCAGTTGGTTGCTAACTAACCGTACGAGTAATATCG
TACCGAGAGTTCGAATCTCTCCTCTTCCGCCA
Downstream region at tRNA end position
aagttaatta
Secondary structure (Cloverleaf model)
>SRA1007990	Ser	GCT
                   t      GCCA aagttaatta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C T C T C     A
      C G A        G      | | | | |     G
    G       G T G G       G A G A G     C
    G         | | |                 T T
    T       A A C C
      T G A        A     CGTACGAGTAATATCGTACC
                    G - C
                    T - A
                    T - A
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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