The detailed information of tRNA gene sequence


Sequence ID>SRA1007996
Genome IDSRR020490.157611
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 226
End posion on genome 134
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position
tcttaataat
tRNA gene sequence
GGAGGTGAATGAGCGCCTGGTGGGCTCCCCGGTCTTCAAAACCGGTGAAAGGTTTAATAA
TCTTTGGCGGGTTCGATTCCCGTCCACCTCCGCta
Downstream region at tRNA end position
attaatatat
Secondary structure (Cloverleaf model)
>SRA1007996	SeC	TCA
                   t      GCta attaatatat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     A   C          T T
                    A     T G C C C     A
      C C G        T      + | | | |     G
    T       C G A G       G C G G G     C
    G       | | | |                 T T
    G       G C T C
      T G G        C     TGAAAGGTTTAATAATCTTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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