The detailed information of tRNA gene sequence


Sequence ID>SRA1008004
Genome IDSRR020490.161771
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 179
End posion on genome 102
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
aacaaaaaag
tRNA gene sequence
GGGCCCATAGCTCAATTGGTTAGAGCAACGGACTCATAATCCGCAGGGTTCGGGGTTCAA
GTCCCTGTGGGCCCACAA
Downstream region at tRNA end position
atgagtagtc
Secondary structure (Cloverleaf model)
>SRA1008004	Met	CAT
                   g      ACAA atgagtagtc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G T C C C     A
      T A A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGGTT
                    A   C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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