The detailed information of tRNA gene sequence


Sequence ID>SRA1008018
Genome IDSRR020490.167645
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 103
End posion on genome 29
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aatagtaact
tRNA gene sequence 
GGGGCTGTAGTTCAGTTGGTTAGAACGCCGGCCTGTCAAGCCGGAGGTCGCGAGTTCGAG
TCTCGTCAGTCCCGCtg
Downstream region at tRNA end position 
tagaccccgt
Secondary structure (Cloverleaf model)
>SRA1008018	Asp	GTC
                   t      GCtg tagaccccgt
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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