The detailed information of tRNA gene sequence


Sequence ID>SRA1008062
Genome IDSRR020490.187202
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 75
End posion on genome 151
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aattattttt
tRNA gene sequence 
GGGATCGTAGTTCAGTTGGTTAGAACGCCGGCCTGTCAAGCCGGAGGTCGCGAGTTCGAG
TCTCGTCGGTCCCGCAA
Downstream region at tRNA end position 
tcattaataa
Secondary structure (Cloverleaf model)
>SRA1008062	Asp	GTC
                   t      GCAA tcattaataa
                     G - C
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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