The detailed information of tRNA gene sequence


Sequence ID>SRA1008063
Genome IDSRR020490.187346
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 167
End posion on genome 255
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aattttaagt
tRNA gene sequence 
GGAGAGTTGGTCGAGTGGTTTATGGCTCTAGTCTTGAAAACTAGCATGGGGGCAACTCCA
ATCGGGGGTTCGAATCCCCCACTCTCCGCtc
Downstream region at tRNA end position 
cttgtcgggg
Secondary structure (Cloverleaf model)
>SRA1008063	Ser	TGA
                   t      GCtc cttgtcgggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C T G       G G G G G     C
    G       + | + |                 T T
    T       T G G C
      T T A        T     CATGGGGGCAACTCCAATC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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