The detailed information of tRNA gene sequence


Sequence ID>SRA1008065
Genome IDSRR020490.187966
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 208
End posion on genome 133
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aatattcatt
tRNA gene sequence 
GGGGCCGTAGCTCAGTTGGGAGAGCGCGTGGATGGCATTCACGAGGTCGTCGGTTCGATC
CCGTCCGGCTCCACAA
Downstream region at tRNA end position 
aattattttt
Secondary structure (Cloverleaf model)
>SRA1008065	Ala	GGC
                   t      ACAA aattattttt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     C T G C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G - C
                    T - A
                    G - C
                    G + T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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