The detailed information of tRNA gene sequence


Sequence ID>SRA1008079
Genome IDSRR020490.191583
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 161
End posion on genome 68
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cagtttatat
tRNA gene sequence 
GGAAGCGTGGCTGAGCCAGGTTTAAAGCAGCGGGTTGCTAACTCGTCACAGGTGGAAACA
TCTGTCGTAGGTTCGAATCCTACCGCTTCCGCCA
Downstream region at tRNA end position 
attaaaaaaa
Secondary structure (Cloverleaf model)
>SRA1008079	Ser	GCT
                   t      GCCA attaaaaaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A T C C     A
    C C G A        G      | | | | |     G
  A         G T C G       G T A G G     C
  G           | | |                 T T
  G         A A G C
    T T T A        A     CACAGGTGGAAACATCTGTC
                    G + T
                    C - G
                    G - C
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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